package AnalyzeSkeleton;
import java.util.ArrayList;
public class SkeletonResult { int numOfTrees; int[] numberOfBranches = null; int[] numberOfEndPoints = null; int[] numberOfJunctionVoxels = null; int[] numberOfSlabs = null; int[] numberOfJunctions = null; int[] numberOfTriplePoints = null; int[] numberOfQuadruplePoints = null; double[] averageBranchLength = null; double[] maximumBranchLength = null; int[] numberOfVoxels = null; ArrayList<Point> listOfEndPoints = null; ArrayList<Point> listOfJunctionVoxels = null; ArrayList<Point> listOfSlabVoxels = null; ArrayList<Point> listOfStartingSlabVoxels = null; private Graph[] graph = null;
public SkeletonResult(int numOfTrees) { this.numOfTrees = numOfTrees; }
public void setNumOfTrees(int numOfTrees) { this.numOfTrees = numOfTrees; }
public void setBranches(int[] numberOfBranches) { this.numberOfBranches = numberOfBranches; }
public void setJunctions(int[] numberOfJunctions) { this.numberOfJunctions = numberOfJunctions; }
public void setEndPoints(int[] numberOfEndPoints) { this.numberOfEndPoints = numberOfEndPoints; }
public void setJunctionVoxels(int[] numberOfJunctionVoxels) { this.numberOfJunctionVoxels = numberOfJunctionVoxels; }
public void setSlabs(int[] numberOfSlabs) { this.numberOfSlabs = numberOfSlabs; }
public void setNumberOfVoxels(int[] numberOfVoxels) { this.numberOfVoxels = numberOfVoxels; }
public void setTriples(int[] numberOfTriplePoints) { this.numberOfTriplePoints = numberOfTriplePoints; }
public void setQuadruples(int[] numberOfQuadruplePoints) { this.numberOfQuadruplePoints = numberOfQuadruplePoints; }
public void setAverageBranchLength(double[] averageBranchLength) { this.averageBranchLength = averageBranchLength; }
public void setMaximumBranchLength(double[] maximumBranchLength) { this.maximumBranchLength = maximumBranchLength; }
public void setListOfEndPoints(ArrayList<Point> listOfEndPoints) { this.listOfEndPoints = listOfEndPoints; }
public void setListOfJunctionVoxels(ArrayList<Point> listOfJunctionVoxels) { this.listOfJunctionVoxels = listOfJunctionVoxels; }
public void setListOfSlabVoxels(ArrayList<Point> listOfSlabVoxels) { this.listOfSlabVoxels = listOfSlabVoxels; }
public void setListOfStartingSlabVoxels(ArrayList<Point> listOfStartingSlabVoxels) { this.listOfStartingSlabVoxels = listOfStartingSlabVoxels; }
public void setGraph(Graph[] graph) { this.graph = graph; }
public int getNumOfTrees() { return this.numOfTrees; }
public int[] getBranches() { return this.numberOfBranches; }
public int[] getJunctions() { return this.numberOfJunctions; }
public int[] getEndPoints() { return this.numberOfEndPoints; }
public int[] getJunctionVoxels() { return this.numberOfJunctionVoxels; }
public int[] getSlabs() { return this.numberOfSlabs; }
public int[] getTriples() { return this.numberOfTriplePoints; }
public int[] getQuadruples() { return this.numberOfQuadruplePoints; }
public double[] getAverageBranchLength() { return this.averageBranchLength; }
public double[] getMaximumBranchLength() { return this.maximumBranchLength; }
public int[] getNumberOfVoxels() { return this.numberOfVoxels; }
public ArrayList<Point> getListOfEndPoints() { return this.listOfEndPoints; }
public ArrayList<Point> getListOfJunctionVoxels() { return this.listOfJunctionVoxels; }
public ArrayList<Point> getListOfSlabVoxels() { return this.listOfSlabVoxels; }
public ArrayList<Point> getListOfStartingSlabVoxels() { return this.listOfStartingSlabVoxels; }
public Graph[] getGraph() { return this.graph; }
public int[] calculateNumberOfVoxels() { this.numberOfVoxels = new int[this.numOfTrees];
for(int i = 0; i < this.numOfTrees; ++i) { this.numberOfVoxels[i] = this.numberOfEndPoints[i] + this.numberOfJunctionVoxels[i] + this.numberOfSlabs[i]; }
return this.numberOfVoxels; }}
